Huang Lab @ Jimei University

Computational Biophysics

Qiaoling Lin (林巧灵), Graduated

Protein pKa prediction.

B. S. Computer science and technology. Jimei University. (2019.09 - 2023.07)
physical electronics. Xiamen University. (2023.09-)
Zhitao Cai (蔡志涛), Research Assistant

Leading developer of Protein pKa predictor DeepKa, database and web server; Molecular mechanism of voltage-gated proton channel Hv1

B. S. Software Engineering . Jimei University. (2017.09 - 2020.07)
Research assistant. Computational Biophysics Lab, Jimei University. (2020.09-)
Xiaowei Lei (雷晓伟), Graduated

Development of web server AcademicDock

B.S. Software Engineering . Jimei University. (2020.09 - 2024.07)
Software Engineering . Fuzhou University. (2025.09 - )
Jiahao He (何嘉豪), Graduate student

Solvent accessible surface area; Molecular mechanism of sodium-proton antiporter NhaA; OpenMM plugin development; Membrane protein pKa database.

B.S. Software Engineering . Jimei University. (2021.09 - 2025.07)
Software Engineering . Jimei University. (2025.09-)
Yanping Zeng (曾燕萍), Undergraduate student

Molecular mechanism of voltage-gated proton channel Hv1

Computer science and technology. Jimei University. (2022.09-)
Zhihao Wu (吴志豪), Graduated

Protein secondary structure prediction

B. S. Software Engineering . Jimei University. (2019.09 - 2023.07)
Software engineering. Nanchang University. (2023.09-)
Hao Peng (彭浩), Graduated

Leading developer of DeepKa web server

B. S. Software Engineering . Jimei University. (2019.09 - 2023.07)
Software engineering. Yunnan University. (2023.09-)
Chen Xia (夏琛), Graduated

Protein secondary structure prediction.

Computer science and technology. Jimei University. (2020.09 -)
Yongxian Wang (王永贤), Graduated

Protein pKa prediction

B. S. Software Engineering . Jimei University. (2017.09 - 2020.07)
Software Engineering. Beijing Post University. (2020.09 -)
Zhiliang Lyu (吕志亮), Graduated

Leading developer of protein secondary structure predictor MLPRNN; Leading developer of AcademicDock.

B. S. Software Engineering. Jimei University. (2016.09 - 2020.07)
Computer Science. The University of Georgia. (2021.09-2023.03)
Enling Li (李恩灵), Graduated

Protein ligand binding affinity prediction

B. S. Software Engineering . Jimei University. (2018.09 - 2022.07)
Computer Science and Technology. Xidian University. (2022.09 - )
Jieyu Zhao (赵婕语), Graduated

Solvent Accessible Surface Area

B. S. Software Engineering . Jimei University. (2018.09 - 2022.07)
Software Engineering. Chengdu Information Engineering University. (2022.09 - )
Qiuchen Yue (岳秋辰), Undergraduate student

Free energy calculation

Intelligence sience and technology. Jimei University. (2022.09-)
Jiawen Sun (孙佳雯), Undergraduate student

Molecular mechanism of lysosomal cholesterol egress by NPC1

Intelligence sience and technology. Jimei University. (2022.09-)
Shuo Sun (孙硕), Graduated

Molecular mechanism of sodium-proton anitporter NhaA; OpenMM plugin development.

B.S. Software Engineering . Jimei University. (2021.09 - 2025.07)
Biophysics. Nanjing University. (2025.09 - )
Xiangxiang Lu (卢相相), Graduate student

Method development and application of protein pKa predictor.

B.C. Software Engineering . East China University of Technology. (2018.09 - 2022.06)
Software Engineering . Jimei University. (2023.09-)
Chenyang Gong (巩晨阳), Undergraduate student

Modeling of protein pKa predictor

Software Engineering . Jimei University. (2022.09-)
Jinxi Wu (吴锦曦) Undergraduate student

AI model development for the prediction of protein ionizable site pKa's

Software Engineering. Jimei University. (2023.09-)
Chengzhang Zhang (张成长) Undergraduate student

AI model development for the prediction of protein ionizable site pKa's

Software Engineering. Jimei University. (2023.09-)
Wenting Jia (贾雯婷) Undergraduate student

Molecular mechanism of lysosomal cholesterol egress by NPC1

Software Engineering. Jimei University. (2023.09-)
Yansheng Chen (陈岩升) Undergraduate student

AI-based free energy calculation and membrane protein pKa database

Data science and big data tech. Jimei University. (2023.09-)
Liangni Li (李靓妮) Undergraduate student

Molecular mechanism of voltage-gated proton channel Hv1

Data science and big data tech. Jimei University. (2023.09-)
Yuxian Shen (沈育贤) Undergraduate student

Molecular mechanism of sodium-proton antiporter NhaA.

Software Engineering. Jimei University. (2024.09 -)
Hongyu Lin (林鸿昱) Undergraduate student

AI-based free energy calculation.

Software Engineering. Jimei University. (2024.09-)